STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ56135.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)    
Predicted Functional Partners:
AIQ56133.1
Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.692
AIQ56136.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.650
AIQ56134.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.546
AIQ56146.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.527
corA
Metal transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
       0.516
AIQ59162.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.508
AIQ56137.1
Inorganic phosphate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.501
AIQ58856.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.498
AIQ61287.1
Flagellar protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.467
AIQ56995.1
GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.463
Your Current Organism:
Paenibacillus borealis
NCBI taxonomy Id: 160799
Other names: CCUG 43137, CIP 107056, DSM 13188, Paenibacillus borealis Elo et al. 2001, strain KK19
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.