Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AIQ56227.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family. (251 aa)    
Predicted Functional Partners:
AIQ57683.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.744
AIQ58327.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.744
AIQ59602.1
5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
       0.453
AIQ56226.1
Prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.450
AIQ56228.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.443
AIQ57423.1
Molybdopterin converting factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.411
Your Current Organism:
Paenibacillus borealis
NCBI taxonomy Id: 160799
Other names: CCUG 43137, CIP 107056, DSM 13188, Paenibacillus borealis Elo et al. 2001, strain KK19
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