Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AIQ56589.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)    
Predicted Functional Partners:
AIQ56588.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.526
AIQ56230.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.498
AIQ59264.1
Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.496
AIQ57449.1
Glycoside hydrolase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
 
 
 
 0.482
AIQ58619.1
Beta-glucuronidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
 
 
 
 0.477
nanE
N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
  
 0.420
AIQ56599.1
N-acetylmannosamine-6-phosphate 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.415
AIQ56317.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.402
AIQ57030.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.402
AIQ57676.1
Glycoside hydrolase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.402
Your Current Organism:
Paenibacillus borealis
NCBI taxonomy Id: 160799
Other names: CCUG 43137, CIP 107056, DSM 13188, Paenibacillus borealis Elo et al. 2001, strain KK19
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