STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ57285.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)    
Predicted Functional Partners:
AIQ59771.1
acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.892
AIQ59335.1
Biotin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.777
AIQ57284.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.776
AIQ55575.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.744
AIQ57408.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.743
AIQ55549.1
Inhibitor of sigma-G Gin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.735
AIQ60235.1
precorrin-3B C17-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.732
AIQ60450.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.732
AIQ56627.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.730
AIQ59041.1
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.728
Your Current Organism:
Paenibacillus borealis
NCBI taxonomy Id: 160799
Other names: CCUG 43137, CIP 107056, DSM 13188, Paenibacillus borealis Elo et al. 2001, strain KK19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.