Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AIQ57388.1Beta-phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)    
Predicted Functional Partners:
AIQ57387.1
Maltose phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
AIQ59814.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
AIQ60032.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.949
AIQ61472.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.924
AIQ59813.1
Beta-phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.903
AIQ60356.1
Cyclomaltodextrinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.577
AIQ58969.1
Cyclomaltodextrinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.572
AIQ57391.1
Cyclomaltodextrinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.569
AIQ60753.1
Alpha amylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.551
AIQ57394.1
Arabinogalactan ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.520
Your Current Organism:
Paenibacillus borealis
NCBI taxonomy Id: 160799
Other names: CCUG 43137, CIP 107056, DSM 13188, Paenibacillus borealis Elo et al. 2001, strain KK19
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