Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AIQ57869.1Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (558 aa)    
Predicted Functional Partners:
AIQ57877.1
Arabinoxylan arabinofuranohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.897
AIQ56232.1
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.863
AIQ58732.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.735
AIQ56159.1
Glycoside hydrolase family 5; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.705
AIQ58029.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.705
AIQ59300.1
Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.698
AIQ58082.1
Xyloglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.671
AIQ60376.1
Cellulose 1,4-beta-cellobiosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.659
AIQ60377.1
Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.645
AIQ56459.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 26 family.
  
   
 0.599
Your Current Organism:
Paenibacillus borealis
NCBI taxonomy Id: 160799
Other names: CCUG 43137, CIP 107056, DSM 13188, Paenibacillus borealis Elo et al. 2001, strain KK19
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.