Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AIQ59318.1Glutathione transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)    
Predicted Functional Partners:
AIQ59319.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.629
AIQ59320.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.628
AIQ59317.1
Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.581
AIQ55919.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.580
AIQ59316.1
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.559
AIQ59315.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.538
msrA-2
Methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.489
AIQ57430.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.479
AIQ58594.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.459
AIQ59527.1
2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.454
Your Current Organism:
Paenibacillus borealis
NCBI taxonomy Id: 160799
Other names: CCUG 43137, CIP 107056, DSM 13188, Paenibacillus borealis Elo et al. 2001, strain KK19
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