Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AIQ59345.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)    
Predicted Functional Partners:
AIQ57761.1
Rhomboid family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.746
AIQ59344.1
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.648
murA-3
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
   
 0.537
cinA
Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
 
     0.525
AIQ61312.1
Stage II sporulation protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.490
AIQ59346.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.477
AIQ59347.1
Quaternary ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.477
AIQ59348.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.468
murA-2
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
   
 0.460
AIQ60237.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.456
Your Current Organism:
Paenibacillus borealis
NCBI taxonomy Id: 160799
Other names: CCUG 43137, CIP 107056, DSM 13188, Paenibacillus borealis Elo et al. 2001, strain KK19
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.