Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AIQ59608.1Stage V sporulation protein AA; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)    
Predicted Functional Partners:
AIQ59607.1
Stage V sporulation protein AB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.971
AIQ59773.1
Stage III sporulation protein AG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.669
AIQ57285.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.667
AIQ55588.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.664
AIQ55587.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.637
AIQ60240.1
Sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.629
AIQ59774.1
Stage III sporulation protein AE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.611
AIQ59733.1
Stage II sporulation protein M; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.605
AIQ59634.1
Sporulation sigma factor SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
     0.593
AIQ60573.1
Lipoprotein LpqB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.590
Your Current Organism:
Paenibacillus borealis
NCBI taxonomy Id: 160799
Other names: CCUG 43137, CIP 107056, DSM 13188, Paenibacillus borealis Elo et al. 2001, strain KK19
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.