STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ60917.1Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)    
Predicted Functional Partners:
AIQ60916.1
Adenine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.814
AIQ60918.1
Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.753
AIQ60915.1
Ethanolamine utilization protein EutN; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.693
AIQ60914.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.650
AIQ60913.1
Carboxysome structural protein EutM; Ethanolamine utilization protein; involved in the degredation of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.634
AIQ60925.1
Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.595
AIQ57396.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.531
AIQ60864.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.473
AIQ56372.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.472
AIQ58136.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.469
Your Current Organism:
Paenibacillus borealis
NCBI taxonomy Id: 160799
Other names: CCUG 43137, CIP 107056, DSM 13188, Paenibacillus borealis Elo et al. 2001, strain KK19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.