STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ61512.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)    
Predicted Functional Partners:
AIQ61514.1
Glutathionylspermidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.951
AIQ61511.1
Ion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.903
AIQ61513.1
Gram-positive signal peptide protein, YSIRK family; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.868
AIQ61515.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.868
AIQ61516.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.829
AIQ61067.1
Anti-sigma W factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.765
AIQ61517.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.642
AIQ56374.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.637
AIQ57255.1
Membrane protease regulatory membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.630
AIQ57711.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.625
Your Current Organism:
Paenibacillus borealis
NCBI taxonomy Id: 160799
Other names: CCUG 43137, CIP 107056, DSM 13188, Paenibacillus borealis Elo et al. 2001, strain KK19
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