STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ61518.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)    
Predicted Functional Partners:
AIQ61519.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.903
AIQ55865.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.753
AIQ57885.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.742
AIQ60899.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.741
AIQ60501.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.737
AIQ57138.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.736
AIQ57857.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.736
AIQ57052.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.732
AIQ60987.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.732
AIQ57891.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.730
Your Current Organism:
Paenibacillus borealis
NCBI taxonomy Id: 160799
Other names: CCUG 43137, CIP 107056, DSM 13188, Paenibacillus borealis Elo et al. 2001, strain KK19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.