STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107667871Protein FAM111A-like isoform X1. (673 aa)    
Predicted Functional Partners:
ENSSANP00000030886
annotation not available
     
 0.584
ENSSANP00000082320
Nuclear pore complex protein Nup214-like.
     
 0.584
ENSSANP00000001278
Probable N-acetyltransferase CML3.
      
 0.583
ENSSANP00000011126
Nuclear pore complex protein Nup50-like.
     
 0.511
LOC107687567
Nuclear pore complex protein Nup50-like.
     
 0.511
ENSSANP00000068567
MRNA export factor-like.
   
 
 0.501
rae1
MRNA export factor isoform X1.
   
 
 0.501
LOC107670178
NTF2-related export protein 2-like isoform X1.
     
 0.498
LOC107666598
NTF2-related export protein 2-like.
     
 0.498
LOC107687842
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39.
      
 0.481
Your Current Organism:
Sinocyclocheilus anshuiensis
NCBI taxonomy Id: 1608454
Other names: KIZ 12060239, KIZ 12070271, KIZ 12070276, KIZ 12070277, KIZ 12070280, S. anshuiensis, Sinocyclocheilus anshuiensis Gan, Wu, Wei & Yang, 2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.