STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSANP00000005776LOW QUALITY PROTEIN: RNA-binding protein MEX3B-like. (523 aa)    
Predicted Functional Partners:
ENSSANP00000067001
Serine/arginine repetitive matrix 4.
    
 0.672
LOC107673280
Snurportin-1-like isoform X1.
    
 
 0.608
LOC107680143
Snurportin-1-like.
    
 
 0.608
LOC107653169
Biogenesis of lysosome-related organelles complex 1 subunit 1.
     
 0.593
LOC107701821
Interleukin-1 receptor-associated kinase 1-like.
    
 0.580
LOC107674316
Interleukin-1 receptor-associated kinase 1-like.
    
 0.580
ENSSANP00000039511
Intraflagellar transport 81 homolog.
    
 0.512
ift81
Intraflagellar transport protein 81 homolog.
    
 0.512
ENSSANP00000004973
MRNA-decapping enzyme 1A-like isoform X1.
   
 
 0.487
LOC107669027
MRNA-decapping enzyme 1A-like isoform X1.
   
 
 0.487
Your Current Organism:
Sinocyclocheilus anshuiensis
NCBI taxonomy Id: 1608454
Other names: KIZ 12060239, KIZ 12070271, KIZ 12070276, KIZ 12070277, KIZ 12070280, S. anshuiensis, Sinocyclocheilus anshuiensis Gan, Wu, Wei & Yang, 2013
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