STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSANP00000009603annotation not available (320 aa)    
Predicted Functional Partners:
LOC107678423
Beta-2-microglobulin-like.
   
 0.491
LOC107694284
Beta-2-microglobulin.
   
 0.462
LOC107655597
Beta-2-microglobulin-like.
   
 0.462
LOC107665198
Beta-2-microglobulin-like.
   
 0.458
ENSSANP00000056620
Replication protein A2.
   
 0.454
Rpa2
Replication protein A 32 kDa subunit.
   
 0.454
THADA
Thyroid adenoma-associated protein homolog.
    
   0.452
ENSSANP00000077889
annotation not available
    
   0.452
LOC107683323
CST complex subunit STN1-like.
   
 0.446
ENSSANP00000071905
STN1 subunit of CST complex.
   
 0.446
Your Current Organism:
Sinocyclocheilus anshuiensis
NCBI taxonomy Id: 1608454
Other names: KIZ 12060239, KIZ 12070271, KIZ 12070276, KIZ 12070277, KIZ 12070280, S. anshuiensis, Sinocyclocheilus anshuiensis Gan, Wu, Wei & Yang, 2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.