STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107670107Autophagy-related protein 16-1-like isoform X1. (619 aa)    
Predicted Functional Partners:
LOC107692547
Ubiquitin-like protein ATG12.
    
 0.998
ENSSANP00000062130
Autophagy protein 5-like isoform X1.
   
 0.998
LOC107673043
Ubiquitin-like protein ATG12.
    
 0.998
LOC107659953
Ubiquitin-like-conjugating enzyme ATG3 isoform X1.
   
 0.996
LOC107678229
Ubiquitin-like-conjugating enzyme ATG3.
   
 0.996
LOC107674704
WD repeat domain phosphoinositide-interacting protein 2-like.
   
 0.993
LOC107703413
WD repeat domain phosphoinositide-interacting protein 2 isoform X1.
   
 0.993
LOC107688112
WD repeat domain phosphoinositide-interacting protein 1-like isoform X1.
   
 0.992
ENSSANP00000069062
ATG5 autophagy related 5 homolog (S. cerevisiae).
   
 0.983
LOC107676515
Ras-related protein Rab-33B-like.
    
 0.978
Your Current Organism:
Sinocyclocheilus anshuiensis
NCBI taxonomy Id: 1608454
Other names: KIZ 12060239, KIZ 12070271, KIZ 12070276, KIZ 12070277, KIZ 12070280, S. anshuiensis, Sinocyclocheilus anshuiensis Gan, Wu, Wei & Yang, 2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.