STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107678763TBC1 domain family member 25-like. (870 aa)    
Predicted Functional Partners:
LOC107687670
Gamma-aminobutyric acid receptor-associated protein-like.
   
 0.770
LOC107659131
Gamma-aminobutyric acid receptor-associated protein.
   
 0.770
ENSSANP00000026874
Gamma-aminobutyric acid receptor-associated protein-like.
   
 0.770
GABARAPL2
Gamma-aminobutyric acid receptor-associated protein-like 2.
   
 0.770
LOC107659131-2
Gamma-aminobutyric acid receptor-associated protein.
   
 0.770
ENSSANP00000086689
annotation not available
   
 0.770
RAB33A
Ras-related protein Rab-33A-like.
     
 0.752
ENSSANP00000063740
RAB33A, member RAS oncogene family.
     
 0.752
LOC107676515
Ras-related protein Rab-33B-like.
     
 0.747
LOC107671374
Ras-related protein Rab-33B-like.
     
 0.747
Your Current Organism:
Sinocyclocheilus anshuiensis
NCBI taxonomy Id: 1608454
Other names: KIZ 12060239, KIZ 12070271, KIZ 12070276, KIZ 12070277, KIZ 12070280, S. anshuiensis, Sinocyclocheilus anshuiensis Gan, Wu, Wei & Yang, 2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.