STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSANP00000042438Nance-Horan syndrome a (congenital cataracts and dental anomalies). (1471 aa)    
Predicted Functional Partners:
LOC107691191
E3 ubiquitin-protein ligase mib1-like isoform X1.
   
 0.531
LOC107681781
E3 ubiquitin-protein ligase mib1.
   
 0.531
vamp3
Vesicle-associated membrane protein 3.
    
  0.507
ENSSANP00000034902
annotation not available
    
  0.494
ENSSANP00000047031
Nck-associated protein 1-like.
    
  0.494
LOC107701181
Nck-associated protein 1-like.
    
  0.494
LOC107699024
Nck-associated protein 1 isoform X1.
    
  0.494
ENSSANP00000013686
annotation not available
   
  0.491
ENSSANP00000069485
annotation not available
   
  0.491
ENSSANP00000093132
annotation not available
   
  0.491
Your Current Organism:
Sinocyclocheilus anshuiensis
NCBI taxonomy Id: 1608454
Other names: KIZ 12060239, KIZ 12070271, KIZ 12070276, KIZ 12070277, KIZ 12070280, S. anshuiensis, Sinocyclocheilus anshuiensis Gan, Wu, Wei & Yang, 2013
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