STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSANP00000045540Rho guanine nucleotide exchange factor 10-like protein isoform X1. (1306 aa)    
Predicted Functional Partners:
LOC107655412
Ubiquitin carboxyl-terminal hydrolase isozyme L5.
      
 0.534
lsm14b
Protein LSM14 homolog B isoform X1.
      
 0.479
ENSSANP00000014952
Rho guanine nucleotide exchange factor (GEF) 11.
    
0.462
ENSSANP00000026897
Rho guanine nucleotide exchange factor 1-like isoform X1.
    
 0.462
LOC107696008
Rho guanine nucleotide exchange factor 12-like isoform X1.
    
 0.462
ENSSANP00000043125
Rho guanine nucleotide exchange factor (GEF) 12a.
    
0.462
ENSSANP00000050427
Rho guanine nucleotide exchange factor 12-like.
    
0.462
LOC107691754
Rho guanine nucleotide exchange factor 12-like isoform X1.
    
0.462
LOC107680289
Stimulator of interferon genes protein-like.
   
 0.409
LOC107660166
Stimulator of interferon genes protein-like.
   
 0.409
Your Current Organism:
Sinocyclocheilus anshuiensis
NCBI taxonomy Id: 1608454
Other names: KIZ 12060239, KIZ 12070271, KIZ 12070276, KIZ 12070277, KIZ 12070280, S. anshuiensis, Sinocyclocheilus anshuiensis Gan, Wu, Wei & Yang, 2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.