STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107667616TRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6-like. (477 aa)    
Predicted Functional Partners:
LOC107698149
TRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like.
   
 0.997
LOC107678528
TRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A-like.
   
 0.997
Trmt61b
TRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit.
   
 0.990
ftsj3
AdoMet-dependent rRNA methyltransferase SPB1.
   
  
 0.968
LOC107677607
Ribosome biogenesis protein wdr12.
   
    0.942
ENSSANP00000001779
TRNA (guanine-N(7)-)-methyltransferase-like.
   
  
 0.910
Rpf2
Ribosome production factor 2 homolog.
   
  
 0.872
LOC107703563
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase.
   
  
 0.864
LOC107681166
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase.
   
  
 0.864
Rbm19
Multiple RNA-binding domain-containing protein 1.
   
    0.853
Your Current Organism:
Sinocyclocheilus anshuiensis
NCBI taxonomy Id: 1608454
Other names: KIZ 12060239, KIZ 12070271, KIZ 12070276, KIZ 12070277, KIZ 12070280, S. anshuiensis, Sinocyclocheilus anshuiensis Gan, Wu, Wei & Yang, 2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.