STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107678053Golgin subfamily A member 7-like. (143 aa)    
Predicted Functional Partners:
LOC107658015
Palmitoyltransferase ZDHHC9/14/18.
    
 0.815
Zdhhc9
Palmitoyltransferase ZDHHC9/14/18.
    
 0.815
ENSSANP00000063657
Zinc finger DHHC-type containing 8b.
    
 0.758
LOC107672609
Probable palmitoyltransferase ZDHHC8.
    
 0.758
LOC107664565
Palmitoyltransferase ZDHHC5-like.
    
 0.638
Zdhhc5
Palmitoyltransferase ZDHHC5 isoform X1.
    
 0.638
ENSSANP00000084847
Zinc finger DHHC-type containing 5b.
    
 0.638
LOC107674225
Palmitoyltransferase ZDHHC5-like.
    
 0.638
ENSSANP00000041742
Probable palmitoyltransferase ZDHHC8.
    
 0.622
LOC107658142
Probable palmitoyltransferase ZDHHC24 isoform X1.
    
 0.607
Your Current Organism:
Sinocyclocheilus anshuiensis
NCBI taxonomy Id: 1608454
Other names: KIZ 12060239, KIZ 12070271, KIZ 12070276, KIZ 12070277, KIZ 12070280, S. anshuiensis, Sinocyclocheilus anshuiensis Gan, Wu, Wei & Yang, 2013
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