STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACSF3-2acyl-CoA synthetase family member 3. (553 aa)    
Predicted Functional Partners:
med1
Mediator of RNA polymerase II transcription subunit 1.
    
 0.975
Med23
Mediator of RNA polymerase II transcription subunit 23.
   
 0.970
med20
Mediator of RNA polymerase II transcription subunit 20.
    
 0.960
ENSSANP00000078886
Mediator of RNA polymerase II transcription subunit 15-like isoform X1.
   
 0.944
Med15
Mediator of RNA polymerase II transcription subunit 15 isoform X1.
   
 0.944
LOC107691542
Mediator of RNA polymerase II transcription subunit 10.
    
 0.933
LOC107701288
Mediator of RNA polymerase II transcription subunit 17.
   
 0.933
med10
Mediator of RNA polymerase II transcription subunit 10.
    
 0.933
ENSSANP00000071001
Mediator complex subunit 17.
   
 0.933
LOC107654960
Mediator of RNA polymerase II transcription subunit 6 isoform X1.
    
 0.922
Your Current Organism:
Sinocyclocheilus anshuiensis
NCBI taxonomy Id: 1608454
Other names: KIZ 12060239, KIZ 12070271, KIZ 12070276, KIZ 12070277, KIZ 12070280, S. anshuiensis, Sinocyclocheilus anshuiensis Gan, Wu, Wei & Yang, 2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.