STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSANP00000078040Caspase recruitment domain-containing protein 9-like. (456 aa)    
Predicted Functional Partners:
LOC107656045
Protein kinase C delta type-like isoform X1.
   
 
 0.954
ENSSANP00000032743
Novel protein kinase C delta type.
   
 
 0.954
ENSSANP00000103630
Novel protein kinase C delta type.
   
 
 0.954
ENSSANP00000026892
Tyrosine-protein kinase SYK-like.
   
 
 0.952
LOC107701343
Receptor-interacting serine/threonine-protein kinase 2-like.
   
 
 0.935
LOC107674432
Receptor-interacting serine/threonine-protein kinase 2-like.
   
 
 0.935
LOC107681812
Receptor-interacting serine/threonine-protein kinase 2-like.
   
 
 0.935
LOC107700600
Receptor-interacting serine/threonine-protein kinase 2-like.
   
 
 0.935
ENSSANP00000079942
Interferon regulatory factor 3-like.
     
 0.912
ENSSANP00000010884
Caspase recruitment domain-containing protein 9-like isoform X1.
  
  
 
0.900
Your Current Organism:
Sinocyclocheilus anshuiensis
NCBI taxonomy Id: 1608454
Other names: KIZ 12060239, KIZ 12070271, KIZ 12070276, KIZ 12070277, KIZ 12070280, S. anshuiensis, Sinocyclocheilus anshuiensis Gan, Wu, Wei & Yang, 2013
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