STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107678193Paralemmin-3-like isoform X1. (460 aa)    
Predicted Functional Partners:
ENSSANP00000023673
Testis-expressed sequence 10 protein homolog.
   
 0.631
LOC107657731
Testis-expressed sequence 10 protein homolog.
   
 0.631
ENSSANP00000055776
Pescadillo.
   
 0.596
ENSSANP00000078622
Pescadillo-like.
   
 0.596
ENSSANP00000009427
annotation not available
   
 0.594
ENSSANP00000022325
annotation not available
   
 0.594
ENSSANP00000044733
WD repeat-containing protein 18-like.
   
 0.594
wdr18
Pre-rRNA-processing protein IPI3.
   
 0.594
ENSSANP00000083536
Si:ch73-211l2.3.
   
 0.555
PLAC8L1
PLAC8 like 1.
    
 
 0.508
Your Current Organism:
Sinocyclocheilus anshuiensis
NCBI taxonomy Id: 1608454
Other names: KIZ 12060239, KIZ 12070271, KIZ 12070276, KIZ 12070277, KIZ 12070280, S. anshuiensis, Sinocyclocheilus anshuiensis Gan, Wu, Wei & Yang, 2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.