LOC107654034 protein (Sinocyclocheilus anshuiensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC107654034

Centrosomal protein of 55 kDa-like. (439 aa)

Predicted Functional Partners:

ttk

0.949

LOC107699863

0.931

LOC107669214

0.931

kif4a

0.929

nuf2

0.924

ENSSANP00000028777

0.903

ENSSANP00000038989

0.903

LOC107672274

0.892

LOC107686310

0.892

ENSSANP00000051756

0.877

Your Current Organism:

Sinocyclocheilus anshuiensis

NCBI taxonomy Id: 1608454
Other names: KIZ 12060239, KIZ 12070271, KIZ 12070276, KIZ 12070277, KIZ 12070280, S. anshuiensis, Sinocyclocheilus anshuiensis Gan, Wu, Wei & Yang, 2013

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSANP00000028777	ENSSANP00000051756	ENSSANP00000028777	ENSSANP00000051756	Kinesin-like protein KIF11.	PDZ binding kinase.	0.893
ENSSANP00000028777	LOC107654034	ENSSANP00000028777	ENSSANP00000080366	Kinesin-like protein KIF11.	Centrosomal protein of 55 kDa-like.	0.903
ENSSANP00000028777	LOC107669214	ENSSANP00000028777	ENSSANP00000076987	Kinesin-like protein KIF11.	Disks large-associated protein 5-like isoform X1.	0.942
ENSSANP00000028777	LOC107672274	ENSSANP00000028777	ENSSANP00000047908	Kinesin-like protein KIF11.	Kinesin-like protein KIF23.	0.969
ENSSANP00000028777	LOC107686310	ENSSANP00000028777	ENSSANP00000099919	Kinesin-like protein KIF11.	Kinesin-like protein KIF23.	0.969
ENSSANP00000028777	LOC107699863	ENSSANP00000028777	ENSSANP00000037210	Kinesin-like protein KIF11.	Disks large-associated protein 5-like isoform X1.	0.942
ENSSANP00000028777	kif4a	ENSSANP00000028777	ENSSANP00000038232	Kinesin-like protein KIF11.	Chromosome-associated kinesin KIF4A.	0.982
ENSSANP00000028777	nuf2	ENSSANP00000028777	ENSSANP00000099428	Kinesin-like protein KIF11.	Kinetochore protein Nuf2 isoform X1.	0.981
ENSSANP00000028777	ttk	ENSSANP00000028777	ENSSANP00000078275	Kinesin-like protein KIF11.	Dual specificity protein kinase TTK isoform X1.	0.984
ENSSANP00000038989	ENSSANP00000051756	ENSSANP00000038989	ENSSANP00000051756	Kinesin-like protein KIF11.	PDZ binding kinase.	0.893
ENSSANP00000038989	LOC107654034	ENSSANP00000038989	ENSSANP00000080366	Kinesin-like protein KIF11.	Centrosomal protein of 55 kDa-like.	0.903
ENSSANP00000038989	LOC107669214	ENSSANP00000038989	ENSSANP00000076987	Kinesin-like protein KIF11.	Disks large-associated protein 5-like isoform X1.	0.942
ENSSANP00000038989	LOC107672274	ENSSANP00000038989	ENSSANP00000047908	Kinesin-like protein KIF11.	Kinesin-like protein KIF23.	0.969
ENSSANP00000038989	LOC107686310	ENSSANP00000038989	ENSSANP00000099919	Kinesin-like protein KIF11.	Kinesin-like protein KIF23.	0.969
ENSSANP00000038989	LOC107699863	ENSSANP00000038989	ENSSANP00000037210	Kinesin-like protein KIF11.	Disks large-associated protein 5-like isoform X1.	0.942
ENSSANP00000038989	kif4a	ENSSANP00000038989	ENSSANP00000038232	Kinesin-like protein KIF11.	Chromosome-associated kinesin KIF4A.	0.982
ENSSANP00000038989	nuf2	ENSSANP00000038989	ENSSANP00000099428	Kinesin-like protein KIF11.	Kinetochore protein Nuf2 isoform X1.	0.981
ENSSANP00000038989	ttk	ENSSANP00000038989	ENSSANP00000078275	Kinesin-like protein KIF11.	Dual specificity protein kinase TTK isoform X1.	0.984
ENSSANP00000051756	ENSSANP00000028777	ENSSANP00000051756	ENSSANP00000028777	PDZ binding kinase.	Kinesin-like protein KIF11.	0.893
ENSSANP00000051756	ENSSANP00000038989	ENSSANP00000051756	ENSSANP00000038989	PDZ binding kinase.	Kinesin-like protein KIF11.	0.893

page 1 of 6

Server load: low (12%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2023

Credits

Access

Info

About