STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107696712HEAT repeat-containing protein 3-like. (686 aa)    
Predicted Functional Partners:
Rpf2
Ribosome production factor 2 homolog.
   
 
 0.743
LOC107696574
Large subunit ribosomal protein L11e.
   
 
 0.712
LOC107696574-2
60S ribosomal protein L11.
   
 
 0.712
LOC107692548
Glutamate-rich WD repeat-containing protein 1-like.
   
  
 0.610
LOC107673021
Glutamate-rich WD repeat-containing protein 1-like.
   
  
 0.610
LOC107694375
Large subunit ribosomal protein L5e.
    
 
 0.609
LOC107692344
Large subunit ribosomal protein L5e.
    
 
 0.609
rpl5
Large subunit ribosomal protein L5e.
    
 
 0.609
LOC107659024
Large subunit ribosomal protein L5e.
    
 
 0.609
LOC107668977
Uncharacterized protein C14orf119-like.
   
  
 0.578
Your Current Organism:
Sinocyclocheilus anshuiensis
NCBI taxonomy Id: 1608454
Other names: KIZ 12060239, KIZ 12070271, KIZ 12070276, KIZ 12070277, KIZ 12070280, S. anshuiensis, Sinocyclocheilus anshuiensis Gan, Wu, Wei & Yang, 2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.