STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107663374Sodium channel modifier 1-like. (256 aa)    
Predicted Functional Partners:
sf3b3
Splicing factor 3B subunit 3.
    
   0.914
armc7
Armadillo repeat-containing protein 7.
    
 
 0.856
ENSSANP00000098703
Armadillo repeat-containing protein 7-like.
    
 
 0.856
LOC107690614
Splicing factor 3B subunit 1-like isoform X1.
    
 
 0.829
LOC107659892
Splicing factor 3B subunit 1 isoform X1.
    
 
 0.829
LOC107658472
RING finger protein 113A-like.
   
   0.816
LOC107693494
RING finger protein 113A-like.
   
   0.816
ENSSANP00000026715
Cell division cycle 5-like protein.
    
   0.811
cdc5l
Cell division cycle 5-like protein.
    
   0.811
LOC107692835
Splicing factor 3B subunit 2-like isoform X1.
    
   0.811
Your Current Organism:
Sinocyclocheilus anshuiensis
NCBI taxonomy Id: 1608454
Other names: KIZ 12060239, KIZ 12070271, KIZ 12070276, KIZ 12070277, KIZ 12070280, S. anshuiensis, Sinocyclocheilus anshuiensis Gan, Wu, Wei & Yang, 2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.