STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107655698Cyclin-dependent kinase 13-like isoform X1. (1287 aa)    
Predicted Functional Partners:
CCNK
Cyclin-K-like.
   
 0.973
ENSSANP00000069735
annotation not available
   
 0.973
Polr2a
DNA-directed RNA polymerase II subunit RPB1.
   
 0.957
LOC107665858
LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1-like.
   
 0.957
LOC107657557
Transcription elongation factor SPT5 isoform X1.
    
 0.937
LOC107662786
Transcription elongation factor SPT5-like isoform X1.
    
 0.937
ENSSANP00000012423
annotation not available
    
 0.876
ENSSANP00000061600
annotation not available
    
 0.876
ENSSANP00000000139
LOW QUALITY PROTEIN: cyclin-T2-like.
   
 0.850
LOC107664179
cyclin-T1-like.
   
 0.850
Your Current Organism:
Sinocyclocheilus anshuiensis
NCBI taxonomy Id: 1608454
Other names: KIZ 12060239, KIZ 12070271, KIZ 12070276, KIZ 12070277, KIZ 12070280, S. anshuiensis, Sinocyclocheilus anshuiensis Gan, Wu, Wei & Yang, 2013
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.