STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSANP00000093520RNA polymerase II elongation factor ELL-like. (599 aa)    
Predicted Functional Partners:
LOC107693489
AF4/FMR2 family member 4-like.
   
 0.925
LOC107658291
ELL-associated factor 2-like.
    
 0.871
LOC107661024
ELL-associated factor 1-like.
    
 0.862
LOC107697266
ELL-associated factor 1-like.
    
 0.862
ENSSANP00000055270
Cyclin-dependent kinase 9 (CDC2-related kinase).
    
 0.828
cdk9
Cyclin-dependent kinase 9.
    
 0.828
ENSSANP00000000430
Polymerase (RNA) II (DNA directed) polypeptide C.
    
 0.768
LOC107674973
DNA-directed RNA polymerase II subunit RPB3-like.
    
 0.768
POLR2B
DNA-directed RNA polymerase II subunit RPB2.
    
  0.742
POLR2B-2
RNA polymerase II subunit B.
    
  0.742
Your Current Organism:
Sinocyclocheilus anshuiensis
NCBI taxonomy Id: 1608454
Other names: KIZ 12060239, KIZ 12070271, KIZ 12070276, KIZ 12070277, KIZ 12070280, S. anshuiensis, Sinocyclocheilus anshuiensis Gan, Wu, Wei & Yang, 2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.