STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107680859Tetratricopeptide repeat protein 30A isoform X1. (669 aa)    
Predicted Functional Partners:
ENSSANP00000091833
Intraflagellar transport 46 homolog (Chlamydomonas).
    
 0.993
Ift74
LOW QUALITY PROTEIN: intraflagellar transport protein 74 homolog.
    
 0.991
Ift52
Intraflagellar transport protein 52 homolog isoform X1.
    
 0.989
ENSSANP00000020197
Intraflagellar transport 80 homolog (Chlamydomonas).
  
 
 0.989
ENSSANP00000053444
Intraflagellar transport 88 homolog.
    
 0.989
ift52
Intraflagellar transport 52.
    
 0.989
ENSSANP00000079945
Intraflagellar transport protein 56-like isoform X1.
  
 
 0.989
ENSSANP00000087113
Intraflagellar transport 88 homolog.
    
 0.989
ENSSANP00000020530
annotation not available
    
 0.987
LOC107660119
Intraflagellar transport protein 56 isoform X1.
    
 0.986
Your Current Organism:
Sinocyclocheilus anshuiensis
NCBI taxonomy Id: 1608454
Other names: KIZ 12060239, KIZ 12070271, KIZ 12070276, KIZ 12070277, KIZ 12070280, S. anshuiensis, Sinocyclocheilus anshuiensis Gan, Wu, Wei & Yang, 2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.