STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107663868TBCC domain-containing protein 1. (594 aa)    
Predicted Functional Partners:
LOC107687399
Protein-S-isoprenylcysteine O-methyltransferase-like.
      
 0.605
LOC107703075
Protein-S-isoprenylcysteine O-methyltransferase-like.
      
 0.605
gins1
DNA replication complex GINS protein PSF1.
      
 0.604
ENSSANP00000107282
GINS complex subunit 1 (Psf1 homolog).
      
 0.604
LOC107688983
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial-like.
      
 0.600
LOC107689156
2-oxoisovalerate dehydrogenase subunit beta, mitochondrial-like isoform X1.
      
 0.600
LOC107661029
Popeye domain-containing protein 3-like.
      
 0.586
LOC107697284
Popeye domain-containing protein 3-like.
      
 0.586
LOC107667015
Protein SHQ1 homolog.
   
    0.569
ENSSANP00000096141
SHQ1, H/ACA ribonucleoprotein assembly factor.
   
    0.569
Your Current Organism:
Sinocyclocheilus anshuiensis
NCBI taxonomy Id: 1608454
Other names: KIZ 12060239, KIZ 12070271, KIZ 12070276, KIZ 12070277, KIZ 12070280, S. anshuiensis, Sinocyclocheilus anshuiensis Gan, Wu, Wei & Yang, 2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.