STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMN10023.1Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (95 aa)    
Predicted Functional Partners:
KMN10022.1
Toxin HigB-2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.975
KMN01781.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.898
KMN10027.1
mRNA interferase MqsR; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.718
KMN11677.1
Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.576
KMN11573.1
Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.557
KMN10114.1
RelE toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.557
KMN04162.1
RelE toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.557
KMN08278.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.536
KMM97148.1
Restriction endonuclease HaeIII; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.499
KMN09459.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.492
Your Current Organism:
Pseudomonas helleri
NCBI taxonomy Id: 1608996
Other names: DSM 29165, LMG 28433, LMG:28433, P. helleri, Pseudomonas helleri von Neubeck et al. 2016, Pseudomonas sp. DSM 28141, Pseudomonas sp. DSM 29141, Pseudomonas sp. DSM 29165, Pseudomonas sp. WS4999, Pseudomonas sp. WS5001, Pseudomonas sp. WS5002, strain WS4917
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.