STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMN10023.1Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (95 aa)    
Predicted Functional Partners:
KMN10022.1
Toxin HigB-2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.975
KMN01781.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.898
KMN10027.1
mRNA interferase MqsR; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.718
KMN11677.1
Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.576
KMN11573.1
Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.557
KMN10114.1
RelE toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.557
KMN04162.1
RelE toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.557
KMN08278.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.536
KMM97148.1
Restriction endonuclease HaeIII; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.499
KMN09459.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.492
Your Current Organism:
Pseudomonas helleri
NCBI taxonomy Id: 1608996
Other names: DSM 29165, LMG 28433, LMG:28433, P. helleri, Pseudomonas helleri von Neubeck et al. 2016, Pseudomonas sp. DSM 28141, Pseudomonas sp. DSM 29141, Pseudomonas sp. DSM 29165, Pseudomonas sp. WS4999, Pseudomonas sp. WS5001, Pseudomonas sp. WS5002, strain WS4917
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.