STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALG89577.1Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)    
Predicted Functional Partners:
ALG90476.1
NAD(P)H:quinone oxidoreductase, type IV; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WrbA family.
   
  
 0.593
ALG89578.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.565
ALG89576.1
AMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.473
ALG89393.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.
  
  
 0.469
ALG92042.1
Superoxide dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.465
ALG90172.1
Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.459
ALG90962.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.455
ALG92047.1
Hypothetical protein; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
  
 0.449
ALG90400.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.
   
  
 0.406
ALG90961.1
Ferritin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.
   
  
 0.406
Your Current Organism:
Confluentimicrobium sp. EMB200NS6
NCBI taxonomy Id: 1609966
Other names: C. sp. EMB200-NS6, Confluentimicrobium sp. EMB200-NS6
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.