ALG90003.1 protein (Confluentimicrobium sp. EMB200NS6)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ALG90003.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)

Predicted Functional Partners:

ALG90002.1

0.867

ALG91847.1

0.838

ALG90007.1

0.794

ALG91848.1

0.785

ALG90010.1

0.779

ALG90008.1

0.777

ALG91846.1

0.741

ALG90024.1

0.720

ALG89997.1

0.711

ALG89996.1

0.688

Your Current Organism:

Confluentimicrobium sp. EMB200NS6

NCBI taxonomy Id: 1609966
Other names: C. sp. EMB200-NS6, Confluentimicrobium sp. EMB200-NS6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALG89996.1	ALG89997.1	TQ29_07060	TQ29_07070	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.847
ALG89996.1	ALG90002.1	TQ29_07060	TQ29_07100	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
ALG89996.1	ALG90003.1	TQ29_07060	TQ29_07105	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.688
ALG89996.1	ALG90007.1	TQ29_07060	TQ29_07125	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
ALG89996.1	ALG90008.1	TQ29_07060	TQ29_07145	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.755
ALG89996.1	ALG90010.1	TQ29_07060	TQ29_07155	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.763
ALG89996.1	ALG90024.1	TQ29_07060	TQ29_07260	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TrbJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.505
ALG89996.1	ALG91846.1	TQ29_07060	TQ29_07065	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
ALG89996.1	ALG91848.1	TQ29_07060	TQ29_07135	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.757
ALG89997.1	ALG89996.1	TQ29_07070	TQ29_07060	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.847
ALG89997.1	ALG90002.1	TQ29_07070	TQ29_07100	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.764
ALG89997.1	ALG90003.1	TQ29_07070	TQ29_07105	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.711
ALG89997.1	ALG90007.1	TQ29_07070	TQ29_07125	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712
ALG89997.1	ALG90008.1	TQ29_07070	TQ29_07145	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
ALG89997.1	ALG90010.1	TQ29_07070	TQ29_07155	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.724
ALG89997.1	ALG90024.1	TQ29_07070	TQ29_07260	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Conjugal transfer protein TrbJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.488
ALG89997.1	ALG91846.1	TQ29_07070	TQ29_07065	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.874
ALG89997.1	ALG91847.1	TQ29_07070	TQ29_07095	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.401
ALG89997.1	ALG91848.1	TQ29_07070	TQ29_07135	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.718
ALG90002.1	ALG89996.1	TQ29_07100	TQ29_07060	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762