STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALG90337.1Fe-S cluster assembly protein SufD; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)    
Predicted Functional Partners:
sufC
Cysteine desulfurase; Part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
ALG90341.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.
0.999
ALG90334.1
Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
 0.997
ALG90624.1
FeS assembly SUF system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.927
ALG90335.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.897
ALG90336.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.897
ALG90830.1
NifS; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.840
ALG89641.1
Nitrogen fixation protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.792
ALG90837.1
Cysteine desufuration protein SufE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.773
ALG90243.1
Nitrogen fixation protein NifU; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.760
Your Current Organism:
Confluentimicrobium sp. EMB200NS6
NCBI taxonomy Id: 1609966
Other names: C. sp. EMB200-NS6, Confluentimicrobium sp. EMB200-NS6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.