ALG91899.1 protein (Confluentimicrobium sp. EMB200NS6)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ALG91899.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (363 aa)

Predicted Functional Partners:

ALG90366.1

0.820

ALG90153.1

0.603

ALG90164.1

0.580

ALG91875.1

0.567

ALG90765.1

0.564

ALG90161.1

0.562

ALG90389.1

0.560

ALG90163.1

0.553

ALG91877.1

0.528

ALG90157.1

0.499

Your Current Organism:

Confluentimicrobium sp. EMB200NS6

NCBI taxonomy Id: 1609966
Other names: C. sp. EMB200-NS6, Confluentimicrobium sp. EMB200-NS6

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALG90153.1	ALG90157.1	TQ29_08125	TQ29_08150	Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Gene transfer agent protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.915
ALG90153.1	ALG90161.1	TQ29_08125	TQ29_08170	Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
ALG90153.1	ALG90163.1	TQ29_08125	TQ29_08180	Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage host specificity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
ALG90153.1	ALG90164.1	TQ29_08125	TQ29_08185	Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.833
ALG90153.1	ALG91875.1	TQ29_08125	TQ29_08105	Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.910
ALG90153.1	ALG91877.1	TQ29_08125	TQ29_08145	Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.977
ALG90153.1	ALG91899.1	TQ29_08125	TQ29_09340	Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.603
ALG90157.1	ALG90153.1	TQ29_08150	TQ29_08125	Gene transfer agent protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.915
ALG90157.1	ALG90161.1	TQ29_08150	TQ29_08170	Gene transfer agent protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.962
ALG90157.1	ALG90163.1	TQ29_08150	TQ29_08180	Gene transfer agent protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage host specificity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.960
ALG90157.1	ALG90164.1	TQ29_08150	TQ29_08185	Gene transfer agent protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.828
ALG90157.1	ALG91875.1	TQ29_08150	TQ29_08105	Gene transfer agent protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876
ALG90157.1	ALG91877.1	TQ29_08150	TQ29_08145	Gene transfer agent protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.966
ALG90157.1	ALG91899.1	TQ29_08150	TQ29_09340	Gene transfer agent protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.499
ALG90161.1	ALG90153.1	TQ29_08170	TQ29_08125	Phage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.974
ALG90161.1	ALG90157.1	TQ29_08170	TQ29_08150	Phage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Gene transfer agent protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.962
ALG90161.1	ALG90163.1	TQ29_08170	TQ29_08180	Phage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage host specificity protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
ALG90161.1	ALG90164.1	TQ29_08170	TQ29_08185	Phage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.965
ALG90161.1	ALG90765.1	TQ29_08170	TQ29_11920	Phage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
ALG90161.1	ALG91875.1	TQ29_08170	TQ29_08105	Phage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.852