STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALG91426.12,5-dihydroxypyridine 5,6-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)    
Predicted Functional Partners:
ALG90878.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.975
ALG90875.1
Leucyl aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.911
ALG90898.1
Leucyl aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.909
maiA
Asp/Glu racemase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
 
  
 0.802
ALG90899.1
Asp/Glu racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.802
ALG90876.1
Carbamoylsarcosine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.733
ALG92052.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.699
ALG90903.1
Carbamoylsarcosine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.692
ALG89984.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.441
ALG90874.1
Salicylate 1-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.421
Your Current Organism:
Confluentimicrobium sp. EMB200NS6
NCBI taxonomy Id: 1609966
Other names: C. sp. EMB200-NS6, Confluentimicrobium sp. EMB200-NS6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.