STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJP71553.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa)    
Predicted Functional Partners:
AJP71552.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.686
AJP72474.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.670
AJP71940.1
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.642
AJP71551.1
Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.602
AJP74326.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.561
AJP71024.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.522
AJP71550.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.439
Your Current Organism:
Sphingomonas hengshuiensis
NCBI taxonomy Id: 1609977
Other names: CCTCC AB 2015265, KCTC 42455, S. hengshuiensis, Sphingomonas hengshuiensis Wei et al. 2015, Sphingomonas sp. WHSC-8, strain WHSC-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.