STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG30048.1Predicted metal-dependent hydrolase, TIM-barrel fold. (253 aa)    
Predicted Functional Partners:
SMG28040.1
Hypothetical protein.
    
 0.693
SMG27591.1
Glucose-fructose oxidoreductase.
    
 0.681
SMG06158.1
Benzoate/toluate 1,2-dioxygenase reductase subunit.
    
  0.665
SMG25642.1
Ferredoxin-NADP reductase.
     
 0.662
SMG21897.1
2,4-dichlorophenol 6-monooxygenase.
  
  
  0.505
SMG34603.1
Hypothetical protein.
    
 0.497
SMG32033.1
Salicylate hydroxylase.
  
  
  0.493
SMG30195.1
4,5-DOPA dioxygenase extradiol.
    
 0.477
SMG18412.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
  
  
  0.432
SMG34027.1
Threonine dehydrogenase.
  
 
  0.408
Your Current Organism:
Corynebacterium pollutisoli
NCBI taxonomy Id: 1610489
Other names: C. pollutisoli, Corynebacterium pollutisoli Negi et al. 2016, Corynebacterium sp. VDS11, DSM 100104, KCTC 39687, MCC 2722, strain VDS11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.