STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQP45267.1Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (864 aa)    
Predicted Functional Partners:
AQP46133.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.994
AQP45269.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.944
AQP43760.1
Respiratory nitrate reductase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.928
AQP44128.1
Nitric-oxide reductase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.927
AQP43757.1
Nitrate reductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.913
AQP43758.1
Nitrate reductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.913
AQP43814.1
Cytochrome c nitrite reductase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.908
AQP43815.1
Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome c-552 family.
   
 
 0.907
AQP43761.1
Nitrate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.906
RPIT_10890
uroporphyrinogen-III synthase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.903
Your Current Organism:
Tessaracoccus flavus
NCBI taxonomy Id: 1610493
Other names: DSM 100159, KCTC 39686, MCC 2769, T. flavus, Tessaracoccus flavus Kumari et al. 2016, Tessaracoccus sp. RP1, strain RP1
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