STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQP45408.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)    
Predicted Functional Partners:
AQP45409.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.716
AQP45410.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.692
AQP45411.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.534
AQP45803.1
TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.460
AQP43981.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.456
AQP45211.1
NADPH-dependent ferric siderophore reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.424
Your Current Organism:
Tessaracoccus flavus
NCBI taxonomy Id: 1610493
Other names: DSM 100159, KCTC 39686, MCC 2769, T. flavus, Tessaracoccus flavus Kumari et al. 2016, Tessaracoccus sp. RP1, strain RP1
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