Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AQP45549.1 | AQP45740.1 | RPIT_12650 | RPIT_13765 | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | UDP-galactose phosphate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.762 |
AQP45549.1 | AQP45765.1 | RPIT_12650 | RPIT_13915 | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.425 |
AQP45740.1 | AQP45549.1 | RPIT_13765 | RPIT_12650 | UDP-galactose phosphate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.762 |
AQP45740.1 | AQP45765.1 | RPIT_13765 | RPIT_13915 | UDP-galactose phosphate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.417 |
AQP45764.1 | AQP45765.1 | RPIT_13910 | RPIT_13915 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.946 |
AQP45765.1 | AQP45549.1 | RPIT_13915 | RPIT_12650 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.425 |
AQP45765.1 | AQP45740.1 | RPIT_13915 | RPIT_13765 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-galactose phosphate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.417 |
AQP45765.1 | AQP45764.1 | RPIT_13915 | RPIT_13910 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.946 |
AQP45765.1 | AQP45766.1 | RPIT_13915 | RPIT_13920 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.493 |
AQP45766.1 | AQP45765.1 | RPIT_13920 | RPIT_13915 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.493 |