STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HALO0520Putative uncharacterized protein. (160 aa)    
Predicted Functional Partners:
HALO0518
Putative uncharacterized protein.
 
   
 0.955
HALO0519
Aliphatic nitrilase.
 
     0.947
HALO0516
Putative uncharacterized protein.
 
   
 0.936
HALO0517
N-acetyltransferase GCN5.
 
   
 0.930
HALO0515
MSMEG_0570 family protein.
 
   
 0.927
HALO0514
FAD dependent oxidoreductase.
 
   
 0.905
HALO0521
Transcriptional regulator, GntR family.
 
     0.805
Your Current Organism:
Halomonas sp. R575
NCBI taxonomy Id: 1610576
Other names: H. sp. R57-5, Halomonas sp. R57-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.