Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HALO1433 | HALO1438 | HALO1433 | HALO1438 | HTH-type transcriptional regulator glxA. | Arginine N-succinyltransferase subunit alpha. | 0.591 |
HALO1433 | HALO1439 | HALO1433 | HALO1439 | HTH-type transcriptional regulator glxA. | Arginine N-succinyltransferase. | 0.588 |
HALO1433 | argD | HALO1433 | HALO1437 | HTH-type transcriptional regulator glxA. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.558 |
HALO1438 | HALO1433 | HALO1438 | HALO1433 | Arginine N-succinyltransferase subunit alpha. | HTH-type transcriptional regulator glxA. | 0.591 |
HALO1438 | HALO1439 | HALO1438 | HALO1439 | Arginine N-succinyltransferase subunit alpha. | Arginine N-succinyltransferase. | 0.990 |
HALO1438 | HALO3981 | HALO1438 | HALO3981 | Arginine N-succinyltransferase subunit alpha. | Methyltransferase type 11. | 0.476 |
HALO1438 | arcA | HALO1438 | HALO2707 | Arginine N-succinyltransferase subunit alpha. | Arginine deiminase. | 0.815 |
HALO1438 | argD | HALO1438 | HALO1437 | Arginine N-succinyltransferase subunit alpha. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.962 |
HALO1438 | argH | HALO1438 | HALO0142 | Arginine N-succinyltransferase subunit alpha. | Argininosuccinate lyase. | 0.807 |
HALO1438 | astB | HALO1438 | HALO1441 | Arginine N-succinyltransferase subunit alpha. | N-succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.999 |
HALO1438 | astD | HALO1438 | HALO1440 | Arginine N-succinyltransferase subunit alpha. | N-succinylglutamate 5-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | 0.969 |
HALO1438 | astE | HALO1438 | HALO1679 | Arginine N-succinyltransferase subunit alpha. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.924 |
HALO1438 | speA | HALO1438 | HALO0982 | Arginine N-succinyltransferase subunit alpha. | Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. | 0.900 |
HALO1439 | HALO1433 | HALO1439 | HALO1433 | Arginine N-succinyltransferase. | HTH-type transcriptional regulator glxA. | 0.588 |
HALO1439 | HALO1438 | HALO1439 | HALO1438 | Arginine N-succinyltransferase. | Arginine N-succinyltransferase subunit alpha. | 0.990 |
HALO1439 | HALO3981 | HALO1439 | HALO3981 | Arginine N-succinyltransferase. | Methyltransferase type 11. | 0.476 |
HALO1439 | arcA | HALO1439 | HALO2707 | Arginine N-succinyltransferase. | Arginine deiminase. | 0.815 |
HALO1439 | argD | HALO1439 | HALO1437 | Arginine N-succinyltransferase. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.963 |
HALO1439 | argH | HALO1439 | HALO0142 | Arginine N-succinyltransferase. | Argininosuccinate lyase. | 0.807 |
HALO1439 | astB | HALO1439 | HALO1441 | Arginine N-succinyltransferase. | N-succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.999 |
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