STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HALO3579Oxidoreductase domain protein. (349 aa)    
Predicted Functional Partners:
HALO3580
Trehalose catabolism protein, ThuA, prokaryote.
 
    0.937
HALO0576
Myo-inositol catabolism protein IolE.
 
 
 0.828
HALO0575
Myo-inositol catabolism protein IolD; Belongs to the TPP enzyme family.
 
  
 0.800
HALO1162
Xylose isomerase-like, TIM barrel domain.
 
 
 0.799
HALO0567
KduI/IolB isomerase.
 
  
 0.753
HALO0574
Putative uncharacterized protein.
 
  
 0.640
HALO0898
Putative aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.621
HALO1173
Putative uncharacterized protein.
 
 
 0.619
HALO0867
Inosose dehydratase.
 
 
 0.595
HALO3578
LacI family transcriptional regulator.
     
 0.587
Your Current Organism:
Halomonas sp. R575
NCBI taxonomy Id: 1610576
Other names: H. sp. R57-5, Halomonas sp. R57-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.