STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIS26859.1Type II secretion system protein F; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)    
Predicted Functional Partners:
KIS26927.1
Pilus assembly protein CpaF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.975
KIS26860.1
Type II secretion system protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.964
KIS26926.1
Pilus assembly protein TadE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.923
KIS26858.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.903
KIS26857.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.848
KIS26611.1
Pilus assembly protein CpaF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.830
KIS26735.1
Pilus assembly protein CpaF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.830
KIS26877.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.770
KIS26856.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.759
KIS26876.1
Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.753
Your Current Organism:
Arthrobacter sp. SPG23
NCBI taxonomy Id: 1610703
Other names: A. sp. SPG23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.