STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z55_028126Uncharacterized protein. (135 aa)    
Predicted Functional Partners:
Cni-suox-1
Cytochrome b5 heme-binding domain-containing protein.
    
  0.887
B9Z55_022265
IRK_C domain-containing protein.
    
 0.675
Cni-irk-2
Uncharacterized protein.
    
 0.675
B9Z55_024601
Uncharacterized protein.
    
 0.675
Cni-irk-3
Uncharacterized protein.
    
 0.675
Cni-hipr-1
Uncharacterized protein.
    
 0.663
Cni-pod-2
Uncharacterized protein.
  
 0.586
Cni-T28F3.5
Uncharacterized protein.
  
 0.586
Cni-rnf-5
RING-type domain-containing protein.
    
 0.577
Cni-rpt-1
AAA domain-containing protein; Belongs to the AAA ATPase family.
  
 0.572
Your Current Organism:
Caenorhabditis nigoni
NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.