STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z55_027441Uncharacterized protein. (205 aa)    
Predicted Functional Partners:
Cni-gdi-1
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.979
Cni-bicd-1
Uncharacterized protein.
    
 0.958
B9Z55_022767
Uncharacterized protein.
  
  
0.949
B9Z55_004842
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.929
Cni-vps-39
CNH domain-containing protein.
    
 
 0.920
Cni-vps-52
Uncharacterized protein.
    
 0.912
Cni-vps-53
Vps53_N domain-containing protein.
    
 0.905
Cni-gcc-2
Uncharacterized protein.
    
 0.898
B9Z55_010737
GRIP domain-containing protein.
    
 0.898
Cni-cogc-6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.893
Your Current Organism:
Caenorhabditis nigoni
NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.