STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cni-bus-8Uncharacterized protein. (546 aa)    
Predicted Functional Partners:
Cni-mus-81
Uncharacterized protein.
    
 0.930
Cni-T04A8.7
Aamy domain-containing protein.
  
 0.897
Cni-F53B1.4
NAD(P)-bd_dom domain-containing protein.
  
 
 0.870
Cni-K09H11.1
Uncharacterized protein.
  
 0.867
Cni-tag-335
NTP_transferase domain-containing protein.
  
 0.865
Cni-gyg-1
Uncharacterized protein.
   
 0.856
Cni-T10B10.8
Uncharacterized protein.
   
 0.856
Cni-gyg-2
Uncharacterized protein.
   
 0.856
Cni-H18N23.2
CBM21 domain-containing protein.
   
 0.853
Cni-CC8.2
Protein phosphatase 1 regulatory subunit.
   
 0.853
Your Current Organism:
Caenorhabditis nigoni
NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.