STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B9Z55_017416Uncharacterized protein. (428 aa)    
Predicted Functional Partners:
Cni-K05B2.4
Uncharacterized protein.
  
  
 
0.813
Cni-fbp-1
FBPase domain-containing protein; Belongs to the FBPase class 1 family.
    
  0.805
B9Z55_002136
Uncharacterized protein.
  
  
 
0.803
Cni-pfk-1.2
Uncharacterized protein.
    
  0.796
Cni-art-1
Uncharacterized protein.
     
 0.796
B9Z55_017415
Uncharacterized protein.
  
  
 
0.795
B9Z55_029069
PFK domain-containing protein.
    
  0.718
Cni-pfk-1.1
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.
    
  0.718
B9Z55_000983
Uncharacterized protein.
  
  
 
0.697
Cni-unc-25
Uncharacterized protein.
  
 
 0.656
Your Current Organism:
Caenorhabditis nigoni
NCBI taxonomy Id: 1611254
Other names: C. nigoni, Caenorhabditis nigoni Felix, Braendle & Cutter, 2014, Caenorhabditis sp. 9 JU1325, Caenorhabditis sp. 9 JU1422, Caenorhabditis sp. 9 KK-2011, Caenorhabditis sp. 9 MAF-2010
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.